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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13377546 chr11:77699087 A/G INTS4L1 chr7:64601603-64694600:+ 0.49 6.88 2.41E-11 Box Plot
BLCA rs13378231 chr13:78510149 A/G CD53 chr1:111415776-111442550:+ 0.21 6.02 4.01E-9 Box Plot
BLCA rs13378232 chr13:78510152 A/G CD53 chr1:111415776-111442550:+ 0.21 6.02 4.01E-9 Box Plot
BLCA rs13378946 chr13:78510001 T/C CD53 chr1:111415776-111442550:+ 0.2 5.95 5.99E-9 Box Plot
BLCA rs13378959 chr13:40968176 C/G C13orf23 chr13:39584003-39612252:- 0.74 6.96 1.51E-11 Box Plot
BLCA rs13378959 chr13:40968176 C/G GTF2F2 chr13:45694650-45859044:+ 0.77 6.05 3.43E-9 Box Plot
BLCA rs13378959 chr13:40968176 C/G NHLRC3 chr13:39612443-39624246:+ 0.67 6.08 2.83E-9 Box Plot
BLCA rs13383857 chr2:101118796 T/C LOC285359 chr3:101431278-101432259:+ 0.39 7.23 2.63E-12 Box Plot
BLCA rs13384904 chr2:101056096 G/T LOC285359 chr3:101431278-101432259:+ 0.35 6.31 7.76E-10 Box Plot
BLCA rs13386850 chr2:31445691 A/C CLEC1A chr12:10222153-10264226:- 0.43 6.1 2.63E-9 Box Plot
BLCA rs13389502 chr2:205948989 C/T RTP1 chr3:186915274-186919253:+ 0.61 5.96 5.77E-9 Box Plot
BLCA rs13390620 chr2:237205049 C/T UBE2F chr2:238875469-238951423:+ 0.39 6.13 2.22E-9 Box Plot
BLCA rs13394617 chr2:101061590 T/C LOC285359 chr3:101431278-101432259:+ 0.35 6.27 9.52E-10 Box Plot
BLCA rs13398064 chr2:239946935 A/G ATIC chr2:216176540-216214496:+ 0.68 6.06 3.2E-9 Box Plot
BLCA rs13398064 chr2:239946935 A/G FARSB chr2:223435255-223521056:- 0.63 6.28 8.97E-10 Box Plot